Director of Bioinformatics Core
조동연 Cho, Dongyeon
연구분야
The Bioinformatics core facility offers state of the art next generation sequencing (NGS) including DNA-Seq, RNA-Seq, ChIP-Seq, CLIP-Seq data, Bead-array data analysis, and statistical data analysis.
학력/경력
학력
- - 2000.3 - 2007.2 박사: 서울대학교 컴퓨터공학부
- - 1998.3 - 2000.2 석사: 서울대학교 컴퓨터공학과
- - 1994.3 - 1998.2 학사: 서울대학교 컴퓨터공학과
경력
주요논문
- Lee, H., Cho, D.-Y., Whitworth, C., Eisman, R., Phelps, M., Roote, J., Kaufman, T., Cook, K., Russell, S., Przytycka, T. M., and Oliver, B. (2016) Effects of gene dose, chromatin, and network topology on expression in Drosophila melanogaster, PLOS Genetics, 12(9): e1006295.
- Kim, Y.-A., Cho, D.-Y., Dao, P., and Przytycka, T. M., (2015) MEMCover: Integrated analysis of mutual exclusivity and functional network reveals dysregulated pathways across multiple cancer types, Bioinformatics, 31(12):i284-i292.
- Rhee, D. Y., Cho, D.-Y., Zhai, B., Slattery, M., Ma, L., Mintseris, J., Wong, C. Y., White, K. P., Celniker, S. E., Przytycka, T. M., Gygi, S. P., Obar, R. A., and Artavanis-Tsakonas, S. (2014) Transcription factor networks in Drosophila melanogaster, Cell Reports, 8(6):2031-2043.
- Lee, H., McManus, C. J., Cho, D.-Y., Eaton, M., Renda, F., Somma, M. P., Cherbas, L., May, G., Powell, S., Zhang, D., Zhan, L., Resch, A., Andrews., J., Celniker., S. E., Cherbas, P., Przytycka, T. M., Gatti, M., Oliver, B., Graveley, B., and MacAlpine., D. (2014) DNA copy number evolution in Drosophila cell lines, Genome Biology, 15(8):r70.
- Cho, D.-Y. and Przytycka, T. M. (2013) Dissecting cancer heterogeneity with a probabilistic genotype-phenotype model, Nucleic Acids Research, 41(17):8011-8020.
- Malone, J. H.* , Cho, D.-Y.* , Mattiuzzo, N. R., Artieri, C. G., Jiang, L., Dale, R. K., Smith, H. E., McDaniel, J., Munro, S., Salit, M., Andrews, J., Przytycka, T. M., and Oliver, B. (2012) Mediation of Drosophila autosomal dosage effects and compensation by network interactions, Genome Biology, 13(4):r28. (* Equal contributors)